Added tabs for Installation guide

docs/requirements.txt

 sphinx
 myst_parser
+sphinx-tabs
\ No newline at end of file

docs/source/conf.py

@@ -35,7 +35,7 @@ release = "0.0.1"
 # Add any Sphinx extension module names here, as strings. They can be
 # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
 # ones.
-extensions = ["myst_parser", "sphinx.ext.autodoc"]
+extensions = ["myst_parser", "sphinx.ext.autodoc",'sphinx_tabs.tabs']
 
 napoleon_google_docstring = False
 
@@ -53,9 +53,17 @@ exclude_patterns = []
 # The theme to use for HTML and HTML Help pages.  See the documentation for
 # a list of builtin themes.
 #
-# html_theme = "furo"
+#html_theme = "furo"
 
 # Add any paths that contain custom static files (such as style sheets) here,
 # relative to this directory. They are copied after the builtin static files,
 # so a file named "default.css" will overwrite the builtin "default.css".
 html_static_path = ["_static"]
+
+sphinx_tabs_valid_builders = ['linkcheck']
+
+sphinx_tabs_disable_tab_closing = True
+
+
+
+sphinx_tabs_disable_css_loading = True
\ No newline at end of file

docs/source/index.md

@@ -4,9 +4,6 @@
 
 
 
-<p align="center">
-
-
 <p align="center">
 
 ```{image} https://img.shields.io/pypi/v/bitia.svg
@@ -19,7 +16,6 @@
 </p>
 
 
-<<<<<<< HEAD
 BiTIA is a tool that simplifies the infrastructure required to run complex bioinformatics pipelines. BiTIA plays well with the existing pipeline solution such as snakemake.
 
 BiTIA has two components: **bitia-cli** and **bitita-runner**.
@@ -30,22 +26,6 @@ BiTIA runner is on the serverside and operates the given tasks to produce result
 Most users only need the `bitia-cli` tool to submit tasks.
 BiTIA CLI creates a zip file of the user input(pipeline) containing a unique hash and ships it to the server.
 
-=======
-BiTIA is a tool that simplifies the infrastructure required to run complex bioinformatics pipelines. BiTIA plays well with the existing pipeline solution such as snakement.
-
-BiTIA v1.0 comes with client facing bitia-cli and bitita-runner which manages things at the server end.
-
-BiTIA has two components: bitia-cli and bitia-runner.
-- **bitia-cli**
-Creates a zip file of the user input(pipeline) containing a unique hash and ships it to the server.
-- **bitia-runner**
-    Runs the following tasks in the server:
-    - Creates a docker container with the user input
-    - Runs the pipeline
-    - Sends log to the user
-    - Sends link of results(artifacts) to the user
-    - Interacts with common cache for reading data/reference files 
->>>>>>> 72129f2 (Updated Main Page)
 
 
 [see some examples]: examples
@@ -64,10 +44,6 @@ getting_started/Working
 
 If you want to learn how to use BiTIA and installation, check out the following resources:
 
-<<<<<<< HEAD
-<<<<<<< HEAD
-=======
->>>>>>> 72129f2 (Updated Main Page)
 <details >
 <summary><b>REQUIREMENTS</b></summary>
 
@@ -75,7 +51,6 @@ If you want to learn how to use BiTIA and installation, check out the following
 </details>
 <details>
 <summary><b>INSTALLATION</b></summary>
-<<<<<<< HEAD
 <<<<<<< HEAD
 
   To Install BiTIA using pip, run this command:
@@ -127,18 +102,6 @@ If you want to learn how to use BiTIA and installation, check out the following
 </details>
 
 <details>
-=======
-<div class="termy">
-
-  ```console
-  $ python3 -m  pip install bitia
-
-  
-  ```
-</div>
-</details>
-<details>
->>>>>>> 72129f2 (Updated Main Page)
 <summary><b>GETTING_STARTED</b></summary>
 
 ### Bioinformatics Pipelines
@@ -152,14 +115,7 @@ NGS bioinformatics pipelines are frequently platform specific and may be customi
 
 > Sequence generation (signal processing and base calling) is the process that converts sensor (optical and nonoptical) data from the sequencing platform and identifies the sequence of nucleotides for each of the short fragments of DNA in the sample prepared for analysis. For each nucleotide sequenced in these short fragments (ie, raw reads), a corresponding Phred-like quality score is assigned, which is sequencing platform specific. The read sequences along with the Phred-like quality scores are stored in a FASTQ file, which is a de facto standard for representing biological sequence information
 </details>
-<<<<<<< HEAD
 
-=======
-- [Installation](getting_started/Installation.md) 
-- [Working with BiTIA](getting_started/Working.md)
->>>>>>> 483a0a9 (Added bitia-cli docs info)
-=======
->>>>>>> 72129f2 (Updated Main Page)
 
 
 <details>
@@ -193,7 +149,6 @@ NGS bioinformatics pipelines are frequently platform specific and may be customi
 
 #### Usage Examples
 
-<<<<<<< HEAD
 <<<<<<< HEAD
 - **Running Commands**
 ```bash
@@ -205,18 +160,6 @@ The above command will execute
 ```bash
 $ bitia run bitia.main.sh
 ```
-=======
-
-
-</details>
-
-
-
-<!-- 
-```{eval-rst}
-.. automodule:: bitia
-``` -->
->>>>>>> 72129f2 (Updated Main Page)
 
 </details>
 
@@ -226,10 +169,6 @@ $ bitia run bitia.main.sh
 <!-- 
 ```{eval-rst}
 .. automodule:: bitia
-<<<<<<< HEAD
 ``` -->
-=======
-```
->>>>>>> 483a0a9 (Added bitia-cli docs info)